TOOLS FOR PREDICTION AND ANALYSIS OF PROTEIN-CODING GENE STRUCTURE
SpliceView
- Splice Prediction by using Consensus Sequences -
Select Programs and Organisms:
If you are submitting a sequence, select the desired Programs from the list, type or copy and paste the sequence into the box and press the "Submit" button.
Organisms:
Human
Arabidopsis
Caenorhabditis
Aspergillus
Saccharomyces
Strand:
Direct
Complement
Mail To :
No
Yes
Seq. Name:
Required
The Sequence cannot be longer than 31,000 base pairs
gaattccagg ttggaggggc ggcaacctcc tgccagcctt caggccactc tcctgtgcct gccagaagag acagagcttg aggagagctt gaggagagca ggaaaggtgg aacattgctg ctgctgctca ctcagttcca caggtgggag gaacagcagg gcttagagtg ggggtcattg tgcagatggg aaaacaaagg cccagagagg ggaagaaatg cctaggagct accgagggca ggcgacctca accacagccc agtgctggag ctgtgagtgg atgtagagca gcggaatatc cattcagcca gctcagggga aggacagggg ccctgaagcc aggggatgga gctgcaggga agggagctca gagagaaggg gaggggagtc tgagctcagt ttcccgctgc ctgaaaggag ggtggtacct actcccttca cagggtaact gaatgagaga ctgcctggag gaaagctctt caagtgtggc ccaccccacc ccagtgacac cagcccctga cacgggggag ggagggcagc atcaggaggg gctttctggg cacacccagt acccgtctct gagctttcct tgaactgttg cattttaatc ctcacagcag ctcaacaagg tacataccgt caccatcccc attttacaga tagggaaatt gaggctcgga gcggttaaac aactcacctg aggcctcaca gccagtaagt gggttccctg gtctgaatgt gtgtgctgga ggatcctgtg ggtcactcgc ctggtagagc cccaaggtgg aggcataaat gggactggtg aatgacagaa ggggcaaaaa tgcactcatc cattcactct gcaagtatct acggcacgta cgccagctcc caagcaggtt tgcgggttgc acagcggagc gatgcaatct gatttaggct tttaaaggat tgcaatcaag tgggacccac tagcctcaac cctgtacctc ccctcccctc cacccccagc agtctccaaa ggcctccaac aaccccagag tgggggccat gtatccaaag aaactccaag ctgtatacgg atcacactgg ttttccagga gcaaaaacag aaacagcctg aggctggtca aaattgaacc tcctcctgct ctgagcagcc tagggggcag actaagcaga gggctgtgca gacccacata aagagcctac tgtgtgccag gcacttcacc cgaggcactt cacaagcatg cttgggaatg aaacttccaa ctctttggga tgcaggtgaa acagttcctg gttcagagag gtgaagcggc ctgcctgagg cagcacagct cttctttaca gatgtgcttc cccacctcta ccctgtctca cggcccccca tgccagcctg acggttgtgt ctgcctcagt catgctccat ttttccatcg ggaccatcaa gagggtgttt gtgtctaagg ctgactgggt aactttggat gagcggtctc tccgctccga gcctgtttcc tcatctgtca aacgggctct aacccactct gatctcccag ggcggcagta agtcttcagc atcaggcatt ttggggtgac tcagtaaatg gtagatcttg ctaccagtgg aacagccact aaggattctg cagtgagagc agagggccag ctaagtggta ctctcccaga gactgtctga ctcacgccac cccctccacc ttggacacag gacgctgtgg tttctgagcc aggtacaatg actcctttcg gtaagtgcag tggaagctgt acactgccca ggcaaagcgt ccgggcagcg taggcgggcg actcagatcc cagccagtgg acttagcccc tgtttgctcc tccgataact ggggtgacct tggttaatat tcaccagcag cctcccccgt tgcccctctg gatccactgc ttaaatacgg acgaggacag ggccctgtct cctcagcttc aggcaccacc actgacctgg gacagtgaat cgtaagtatg cctttcactg cgaggggttc tggagaggct tccgagctcc ccatggccca ggcaggcagc aggtctgggg caggaggggg gttgtggagt gggtatccgc ctgctgaggt gcagggcaga tggagaggct gcagctgagc tcctattttc ataataacag cagccatgag ggttgtgtcc tgtttcccag tcctgcccgg tcccccctcg gtacctcctg gtggatacac tggttcctgt aagcagaagt ggatgagggt gtctaggtct gcagtcctgg caccccagga tgggggacac cagccaagat acagcaacag caacaaagcg cagccatttc tttctgtttg cacagctcct ctgtctgtcg ggggctcctg tctgttgtct cctataagcc tcaccacctc tcctactgct tgggcatgca tctttctccc cttctataga tgaggaggtt aaggttcaga gaggggtggg gaggaacgcc ggctcacatt ctccatcccc tccagatatg accaggaaca gacctgtgcc agcctcagcc ttacatcaaa atgggcctcc ccatgcaccg tggacctctg ggccctcctg tcccagtgga ggacaggaag ctgtgagggg cactgtcacc cagggctcaa gctggcattc ctgaataatc gctctgcacc aggccacggc taagctcagt gcgtgattaa gcctcataac cctccaaggc agttactagt gtgattccca ttttacagat gaggaagatg gggacagaga ggtgaataac tggccccaaa tcacacacca tccataattc gggctcaggc acctggctcc agtccccaaa ctcttgaacc tggccctagt gtcactgttt ctcttgggtc tcaggcgctg gatggggaac aggaaacctg ggctgaactt gaggcctctc tgatgctcgg tgacttcaga cagttgctca acctctctgt tctcttgggc aaaacatgat aacctttgac ttctgtcccc tcccctcacc ccacccgacc ttgatctctg aagtgttgga aggatttaat ttttcctgca ctgagttttg gagacaggtc aaaaagatga ccaaggccaa ggtggccagt ttcctataga acgcctctaa aagacctgca gcaatagcag caagaactgg tattctcgag aacttgctgc gcagcaggca cttcttggca ttttatgtgt atttaatttc acaatagctc tatgacaaag tccacctttc tcatctccag gaaactgagg ttcagagagg ttaagtaact tgtccaaggt cacacagcta atagcaagtt gacgtggagc aatctggcct cagagccttt aattttagcc acagactgat gctcccctct tcatttagcc aggctgcctc tgaagttttc tgattcaaga cttctggctt cagctttgta cacagagatg attcaatgtc aggttttgga gcgaaatctg tttaatccca gacaaaacat ttaggattac atctcagttt tgtaagcaag tagctctgtg atttttagtg agttatttaa tgctctttgg ggctcaattt ttctatctat aaaatagggc taataatttg caccttatag ggtaagcttt gaggacagat tagatgatac ggtgcctgta aaacaccagg tgttagtaag tgtggcaatg atggtgacgc tgaggctgtg tttgcttagc atagggttag gcagctggca ggcagtaaac agttggataa tttaatggaa aatttgccaa actcagatgc tgttcactgc tgagcaggag ccccttcctg ctgaaatggt cctggggagt gcagcaggct ctccgggaag aaatctacca tctctcgggc aggagctcaa cctgtgtgca ggtacaggga gggcttcctc acctggtgcc cactcatgca ttacgtcagt tattcctcat ccctgtccaa aggattcttt tctccattgt acagctatga agctagtgct caaagaagtg aagtcattta ccccaggccc cctgccagta agtgacaggg cctggtcaca cttgggttta tttattgccc agttcaacag gttgtttgac cataggcgag attctcttcc ctgcaccctg ccgggttgct cttggtccct tattttatgc tcctgggtag aaatggtgcg agattaggca gggagtggac gcttccctgt ccctggcccc gcaaagagtg ctcccacctg ccccgatccc agaaatgtca ccatgaagcc ttcattcttt tggtttaaag cttggcctca gtgtccgtac accatggggt ccttggccag atggcgactt tctcctctcc agtcgccctc ccaggcacta gcttttagga gtgcagggtg ctgcctctga tagaagggcc aggagagagc aggttttgga gacctgatgt tataaggaac agcttgggag gcataatgaa cccaacatga tgcttgagac caatgtcaca gcccaattct gacattcatc atctgagatc tgaggacaca gctgtctcag ttcatgatct gagtgctggg aaagccaaga cttgttccag ctttgtcact gacttgctgt atagcctcaa caaggccctg accctctctg ggcttcaaac tcttcactgt gaaaggagga aaccagagta ggtgatgtga caccaggaaa gatggatggg tgtgggggaa tgtgctcctc ccagctgtca ccccctcgcc accctccctg caccagcctc tccacctcct ttgagcccag aattcccctg tctaggaggg cacctgtctc gtgcctagcc atgggaattc tccatctgtt ttgctacatt gaacccagat gccattctaa ccaagaatcc tggctgggtg caggggctct cgcctgtaac cccagcactt tgggaggcca aggcaggcgg atcaagaggt caggagttca agacctgcct ggccaacacg gtgaaacctc agctctacta aaaatacaaa aattagccag gcgtggtggc acacgcctgt aatcccagct atttgggaag ctgagacaga agaatttctt gaacccggga ggtggaggtt tcagtgagcc gagatcacgc cactgcactc caccctggcg gataaagcga gactctgtct caaaaaaaac ccaaaaacct atgttagtgt acagagggcc ccagtgaagt cttctcccag ccccactttg cacaactggg gagagtgagg ccccaggacc agaggattct tgctaaaggc caagtggata gtgatggccc tgccaggcta gaagccacaa cctctggccc tgaggccact cagcatattt agtgtcccca ccctgcagag gcccaactcc ctcctgacca ctgagccctg taatgatggg ggaatttcca taagccatga aggactgcac aaagttcagt tgggagtgaa agagaaatta aagggagatg gaaatataca gcactaattt tagcaccgtc ttcagttcta acaacactag ctagctgaag aaaatacaaa catgtattat gtaatgtgtg gtctgttcca tttggattac ttagaggcac gagggccaag gagaaaggtg gtggagagaa accagctttg cacttcattt gttgctttat tggaaggaaa cttttaaaag tccaaggggg ttgaagaatc tcaatatttg ttatttccag ctttttttct ccagtttttc atttcccaaa ttcaaggaca cctttttctt tgtattttgt taagatgatg gttttggttt tgtgactagt agttaacaat gtggctgccg ggcatattct cctcagctag gacctcagtt ttcccatctg tgaagacggc aggttctacc tagggggctg caggcaggtg gtccgaagcc tgggcatatc tggagtagaa ggatcactgt ggggcagggc aggttctgtg ttgctgtgga tgacgttgac tttgaccatt gctcggcaga gcctgctctc gctggttcag ccacaggccc caccactccc tattgtctca gccccgggta tgaaacatgt attcctcact ggcctatcac ctgaagcctt tgaatttgca acacctgcca acccctccct caaaagagtt gccctctcta gatccttttg atgtaaggtt tggtgttgag acttatttca ctaaattctc atacataaac atcactttat gtatgaggca aaatgaggac cagggagatg aatgacttgt cctggctcat acacctggaa agtgacagag tcagattaga tcctaggtct atctgaagtt aaaagaggtg tcttttcact tcccacctcc tccatctact ttaaagcagc acaaacccct gctttcaagg agagatgagc gtctctaaag cccctgacag caagagccca gaactgggac accattagtg acccagacgg caggtaagct gactgcagga gcatcagcct attcttgtgt ctgggaccac agagcattgt ggggacagcc ccgtctcttg ggaaaaaaac cctaagggct gaggatcctt gtgagtgttg ggtgggaaca gctcccagga ggtttaatca cagcccctcc atgctctcta gctgttgcca ttgtgcaaga tgcatttccc ttctgtgcag cagtttccct ggccactaaa tagtgggatt agatagaagc cctccaaggg ctccagcttg acatgattct tgattctgat ctgacccgat tctgataatc gtgggcaggc ccattcctct tcttgtgcct cattttcttc ttttgtaaaa caatggctgt accatttgca tcttagggtc attgcagatg aaagtgttgc tgtccagagc ctgggtgcag gacctagatg taggattctg gttctgctac ttcctcagtg acattgaata gctgacctaa tctctctggc tttggtttct tcatctgtaa aagaaggata ttagcattag cacctcacgg gattgttaca agaaagcaat gaattaacac atgtgagcac ggagaacagt gcttggcata tggtaagcac tacgtacatt ttgctattct tctgattctt tcagtgttac tgatgtcggc aagtacttgg cacaggctgg tttaataatc cctaggcact ttcacgtggt gtcaatccct gatcactggg agtcatcatg tgccttgact cgggcctggc ccccccatct ctgtcttgca ggacaatgcc gtcttctgtc tcgtggggca tcctcctgct ggcaggcctg tgctgcctgg tccctgtctc cctggctgag gatccccagg gagatgctgc ccagaagaca gatacatccc accatgatca ggatcaccca accttcaaca agatcacccc caacctggct gagttcgcct tcagcctata ccgccagctg gcacaccagt ccaacagcac caatatcttc ttctccccag tgagcatcgc tacagccttt gcaatgctct ccctggggac caaggctgac actcacgatg aaatcctgga gggcctgaat ttcaacctca cggagattcc ggaggctcag atccatgaag gcttccagga actcctccgt accctcaacc agccagacag ccagctccag ctgaccaccg gcaatggcct gttcctcagc gagggcctga agctagtgga taagtttttg gaggatgtta aaaagttgta ccactcagaa gccttcactg tcaacttcgg ggacaccgaa gaggccaaga aacagatcaa cgattacgtg gagaagggta ctcaagggaa aattgtggat ttggtcaagg agcttgacag agacacagtt tttgctctgg tgaattacat cttctttaaa ggtaaggttg ctcaaccagc ctgagctgtt tcccatagaa acaagcaaaa atatttctca aaccatcagt tcttgaactc tccttggcaa tgcattatgg gccatagcaa tgcttttcag cgtggattct tcagttttct acacacaaac actaaaatgt tttccatcat tgagtaattt gaggaaataa tagattaaac tgtcaaaact actgacgctc tgcagaactt ttcagagcct ttaatgtcct tgtgtatact gtatatgtag aatatataat gcttagaact atagaacaaa ttgtaataca ctgcataaag ggatagtttc atggaacata ctttacacga ctctagtgtc ccagaatcag tatcagtttt gcaatctgaa agacctgggt tcaaatcctg cctctaacac aattagcttt tgacaaaaac aatgcattct acctctttga ggtgctaatt tctcatctta gcatggacaa aataccattc ttgctgtcag gtttttttag gattaaacaa atgacaaaga ctgtggggat ggtgtgtggc atacagcagg tgatggactc ttctgtatct caggctgcct tcctgcccct gaggggttaa aatgccaggg tcctgggggc cccagggcat tctaagccag ctcccactgt cccaggaaaa cagcataggg gaggggaggt gggaggcaag gccaggggct gcttcctcca ctctgaggct cccttgctct tgaggcaaag gagggcagtg gaggcaagcc aggctgcagt cagcacagct aaagtcctgg ctctgctgtg gccttagtgg gggcccaggt ccctctccag ccccagtctc ctccttctgt ccaatgagaa agctgggatc aggggtccct gaggcccctg tccactctgc atgcctcgat ggtgaagctc tgttggtatg gcagagggga ggctgctcag gcatctgcat ttcccctgcc aatctagagg atgaggaaag ctctcaggaa tagtaagcag aatgtttgcc ctggatgaat aactgagctg ccaattaaca aggggcaggg agccttagac agaaggtacc aaatatgcct gatgctccaa cattttattt gtaatatcca agacaccctc aaataaacat atgattccaa taaaaatgca cagccacgat ggcatctctt agcctgacat cgccacgatg tagaaattct gcatcttcct ctagttttga attatcccca cacaatcttt ttcggcagct tggatggtca gtttcagcac cttttacaga tgatgaagct gagcctcgag ggatgtgtgt cgtcaagggg gctcagggct tctcagggag gggactcatg gtttcttatt ctgctacact cttccaaacc ttcactcacc cctggtgatg cccaccttcc cctctctcca ggcaaatggg agagaccctt tgaagtcaag gacaccgagg aagaggactt ccacgtggac caggtgacca ccgtgaaggt gcctatgatg aagcgtttag gcatgtttaa catccagcac tgtaagaagc tgtccagctg ggtgctgctg atgaaatacc tgggcaatgc caccgccatc ttcttcctgc ctgatgaggg gaaactacag cacctggtaa atgaactcac ccacgatatc atcaccaagt tcctggaaaa tgaagacaga aggtgattcc ccaacctgag ggtgaccaag aagctgccca cacctcttag ccatgttggg actgaggccc atcaggactg gccagagggc tgaggagggt gaaccccaca tccctgggtc actgctactc tgtataaact tggcttccag aatgaggcca ccactgagtt caggcagcgc cgtccatgct ccatgaggag aacagtaccc agggtgagga ggtaaaggtc tcgtccctgg gaacttccca ctccagtgtg gacactgtcc cttcccaata tccagtgccc aaggcaggga cagcagcacc accacacgtt ctggcagaac caaaaaggaa cagatgggct tcctggcaaa ggcagcagtg gagtgtggag ttcaagggta gaatgtccct ggggggacgg gggaagagcc tgtgtggcaa ggcccagaaa agcaaggttc ggaattggaa cagccaggcc atgttcgcag aaggcttgcg tttctctgtc actttatcgg tgctgttaga ttgggtgtcc tgtagtaagt gatacttaaa catgagccac acattagtgt atgtgtgtgc attcgtgatt atgcccatgc cctgctgatc tagttcgttt tgtacactgt aaaaccaaga tgaaaataca aaaggtgtcg ggttcataat aggaatcgag gctggaattt ctctgttcca tgccagcacc tcctgaggtc tctgctccag gggttgagaa agaacaaaga ggctgagagg gtaacggatc agagagccca gagccagctg ccgctcacac cagaccctgc tcagggtggc attgtctccc catggaaaac cagagaggag cactcagcct ggtgtggtca ctcttctctt atccactaaa cggttgtcac tgggcactgc caccagcccc gtgtttctct gggtgtaggg ccctggggat gttacaggct gggggccagg tgacccaaca ctacagggca agatgagaca ggcttccagg acacctagaa tatcagagga ggtggcattt caagcttttg tgattcattc gatgttaaca ttctttgact caatgtagaa gagctaaaag tagaacaaac caaagccgag ttcccatctt agtgtgggtg gaggacacag gagtaagtgg cagaaataat cagaaaagaa aacacttgca ctgtggtggg tcccagaaga acaagaggaa tgctgtgcca tgccttgaat ttcttttctg cacgacaggt ctgccagctt acatttaccc aaactgtcca ttactggaac ctatgatctg aagagcgtcc tgggtcaact gggcatcact aaggtcttca gcaatggggc tgacctctcc ggggtcacag aggaggcacc cctgaagctc tccaaggtga gatcaccctg acgaccttgt tgcaccatgg tatctgtagg gaagaatgtg tgggggctgc agcactgtcc tgaggctgag gaaggggccg agggaaacaa atgaagaccc aggctgagct cctgaagatg cccgtgattc actgacacgg gacggtgggc aaacagcaaa gccaggcagg ggctgctgtg cagctggcac tttcggggcc tcccttgagg ttgtgtcact gaccctgaat ttcaactttg cccaagacct tctagacatt gggccttgat ttatccatac tgacacagaa aggtttgggc taagttgttt caaaggaatt tctgactcct tcgatctgtg agatttggtg tctgaattaa tgaatgattt cagctaaagt gacacttatt ttggaaaact aaaggcgacc aatgaacaac ctgcagttcc atgaatggct gcattatctt ggggtctggg cactgtgaag gtcactgcca gggtccgtgt cctcaaggag cttcaagccg tgtactagaa aggagagagc cctggaggca gacgtggagt gacgatgctc ttccctgttc tgagttgtgg gtgcacctga gcagggggag aggcgcttgt caggaagatg gacagagggg agccagcccc atcagccaaa gccttgagga ggagcaaggc ctatgtgaca gggagggaga ggatgtgcag ggccagggcc gtccaggggg agtgagcgct tcctgggagg tgtccacgtg agccttgctc gaggcctggg atcagcctta caacgtgtct ctgcttctct cccctccagg ccgtgcataa ggctgtgctg accatcgacg agaaagggac tgaagctgct ggggccatgt ttttagaggc catacccatg tctatccccc ccgaggtcaa gttcaacaaa ccctttgtct tcttaatgat tgaacaaaat accaagtctc ccctcttcat gggaaaagtg gtgaatccca cccaaaaata actgcctctc gctcctcaac ccctcccctc catccctggc cccctccctg gatgacatta aagaagggtt gagctggtcc ctgcctgcat gtgatctgta aatccctggg atgttttctc tg
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